Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907646.1_cds_XP_016457743.1_51437
CDS Infomation

[gene=LOC107781537] [db_xref=GeneID:107781537] [protein=FRIGIDA-like protein 3] [protein_id=XP_016457743.1] [location=complement(join(46920..47336,47433..47623,49570..50620))] [gbkey=CDS]
Sequence

ATGGAAGACATGCAATCAGTTTCAACATTGATGGATTGTACGACCTCTAAGATACATCAA
CTCCAGAAAGCATTTGCTGAGTTGGAAAGTCACCGCGCTTTTACTCTCAATCTGAAATGG
AAGCAACTCGAAGAACACTTTGATGGGCTACAGAGGTCCTTTAAAAGGCGTTTCACTGAA
CTGGAAGAACAAGAGAAAGAGTTTGAAACAAAAATAGTTCAGTCTAAAGAGCTATTAGAG
GAGCGTCAAGCAGCTGTTGTTACTAAGGAGCAAACTTCACTTGAGAGGCTCCAGGAGAAA
AGAGATGCAGCTGTCTCCGTCATTGCTATTGCTCTGGAGAAGCAAAGGAAGACTTATTCT
ATAGAACCTGTAGTTATTAATAGTGAGGATCAAGGTGACCCATCTTTTCTGGAGGCAAAG
CCCATGGTTTCTGGGGCAACTGAGAATTATACAGAGGATAATAGCAAACATTCCGAGAAT
GCAATTGTGGAACTCAAGTCTTATCCACAGCTAATGAAACTATGCCAAGACATGGATTCA
GAAGGCCTCCACAAATTTATATCAGACAACCTCAAGAACCTGGCTGCTGTAAGGGAGGAG
ATTCCACTTGCTTTTAGAGCTGCAGGTGACCCTGCCTCTCTGGTTCTTGACTCACTCAAG
GGTTTCTACCCCTCAGAAGTGTCAATGTCAGATGCTAAAAAAGATCCAAATCTTTTAGGC
CTTCGACGAACTTGTATTATGCTGATGGAATGCCTTAGCATTTTATTAACCACCCTGGAA
GTCGATTCTGTTTCAAGTATAATATCTGAAAATGTAAAGCAACGTGCAAAAGCAGTAGCT
GAGGAGTGGAAACCTAAGTTAGATGAACTTGATATTGATGCAAATAACGGGAATTCCTTG
GAGGCTCATGCATTTTTACAGCTTCTAGCTACTTTTGTTATTAATTCCAACTTCAACCAG
GATGATTTATTCAAGCTGCTTCCAATGGTTTCACGTCGTCGCCAAGCTGCTGACCTATAC
CGTTCCCTTGGACTGTCGGACAGAATGCCAGGTGTTCTTGATGTCTTGGTTAGTAAAGGA
AGGCATATAGATGCTGTCAATCTAGCTTTTGCCTTTGAGCTGACTGAGTGGTTCTCACCT
GTTTCTTTACTGAAATCCTACTTGAGCGAAGCAAGTAAAGCATCTTCACCTGTCAAACCT
GGAAATGCTTCGCCTACTGTACATGTTTGTTCCTCTGCCTTGAATGATGTCAATGAGAAG
GAACTGGCTGCTCTAAAGTCTGTAATTAAATGCATTGAAGACCATAAGCTTCAGGAGCAA
TACCCAGTGGATCCCCTCCAGAAAAGGATTCTCCAGTTGGAGAAAGCAAAGGCAGACAAG
AAAAGGGCAACTGAAGTTGTGAAACCTCAAACCAAGAGACCTCGTGCCAATGGCGTAGGA
AATGGATCCCGAGTCACTAATGTTGCTACTGACAAGAACTTCTATGCTAGGACGACTGAT
AGGTACCCGCAATATGTGTATGATAGACCATATGCTTACCCCGTTGCAACTGACACACAT
GTTCCATCATTTTTGGGCACCACTGCTTACAACGTTTCCCACGGGCATGGCAACTTCTTT
GGAAATGGCTACCATTACCAGGCTGCTTACCTGCACTAA

Peptide Sequence

PEP ID

XP_016457743.1
PEP Infomation

PREDICTED: FRIGIDA-like protein 3 [Nicotiana tabacum]
Sequence

MEDMQSVSTLMDCTTSKIHQLQKAFAELESHRAFTLNLKWKQLEEHFDGLQRSFKRRFTE
LEEQEKEFETKIVQSKELLEERQAAVVTKEQTSLERLQEKRDAAVSVIAIALEKQRKTYS
IEPVVINSEDQGDPSFLEAKPMVSGATENYTEDNSKHSENAIVELKSYPQLMKLCQDMDS
EGLHKFISDNLKNLAAVREEIPLAFRAAGDPASLVLDSLKGFYPSEVSMSDAKKDPNLLG
LRRTCIMLMECLSILLTTLEVDSVSSIISENVKQRAKAVAEEWKPKLDELDIDANNGNSL
EAHAFLQLLATFVINSNFNQDDLFKLLPMVSRRRQAADLYRSLGLSDRMPGVLDVLVSKG
RHIDAVNLAFAFELTEWFSPVSLLKSYLSEASKASSPVKPGNASPTVHVCSSALNDVNEK
ELAALKSVIKCIEDHKLQEQYPVDPLQKRILQLEKAKADKKRATEVVKPQTKRPRANGVG
NGSRVTNVATDKNFYARTTDRYPQYVYDRPYAYPVATDTHVPSFLGTTAYNVSHGHGNFF
GNGYHYQAAYLH

Transcript Sequence

Gene sequence data has not been registered.